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BioinformaticsBiointal — Bioinformatics Agency
A vertically integrated bioinformatics agency serving the St. Louis biotech ecosystem. Infrastructure, analysis, and talent — from a scientist who speaks the language.
BioinformaticsCommunityWeb
Index
Projects
Active deployments, research platforms, and select portfolio work.
My Live Websites
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Web DevelopmentFrantz Lab
A translational chemistry laboratory exploring new synthetic methodology in organic chemistry.
Web DevelopmentDNSGo
Research & Select Projects
Research
BioinformaticsEpiBench
Benchmarking suite for DNA methylation detection methods. CNN/PyTorch framework for methylation classification from bisulfite sequencing data, benchmarked against traditional statistical approaches.
BioinformaticsPyTorchMachine LearningGenomics
Research
Nextflownf-core/scge Pipeline
Cloud-native tumor-normal sequencing pipeline for the NIH Common Fund's Somatic Cell Genome Editing program. Built with Nextflow DSL2 and DRAGEN hardware acceleration on AWS.
NextflowAWS BatchDRAGENnf-coreGenomics
Research
PythonDeepLabCut Imaging Pipeline
Machine learning-based pose estimation system for tracking zebrafish behavior in custom experimental rigs, enabling high-throughput behavioral analysis.
PythonDeepLabCutComputer VisionPose Estimation
Research
BERTBERT for Sequence Classification
Transformer-based language models applied to biological sequence classification, exploring gene function prediction and regulatory element annotation.
BERTTransformersNLPPyTorchGenomics